BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E12LP1|AL425886
(845 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 1643 0.0
>3x_Contig1781
Length = 20717
Score = 1643 bits (828), Expect = 0.0
Identities = 843/846 (99%), Gaps = 2/846 (0%)
Strand = Plus / Plus
Query: 1 aaacaccggctacagacccgttacttcattgtggtatcggtccgtcgtccagtacgattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 aaacaccggctacagacccgttacttcattgtggtatcggtccgtcgtccagtacgattg 1683
Query: 61 gttcccatttcttctgtacagtgagtgccatactgaaaaakttggaactaaagcgatgag 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1684 gttcccatttcttctgtacagtgagtgccatactgaaaaatttggaactaaagcgatgag 1743
Query: 121 atgagatgagatgagatgaaccatatacatgagagaagagacaacagaccacaaggttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 atgagatgagatgagatgaaccatatacatgagagaagagacaacagaccacaaggttca 1803
Query: 181 gcaggttaactaaggacaacaataacacgatgagcaaggagtacagcgatgtggatgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 gcaggttaactaaggacaacaataacacgatgagcaaggagtacagcgatgtggatgatt 1863
Query: 241 ttgcgtcagacgaagaagaggacaaccaagtgttgatcactgggaaggatgcgaagaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 ttgcgtcagacgaagaagaggacaaccaagtgttgatcactgggaaggatgcgaagaaga 1923
Query: 301 atgtgattcagtttgatcaagaagaggacgaggaagagcaagaggaagaggacgaggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 atgtgattcagtttgatcaagaagaggacgaggaagagcaagaggaagaggacgaggaag 1983
Query: 361 tacaggatgaagaagaaccggaggataaggtagtacaactcacagaacagcagatagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1984 tacaggatgaagaagaaccggaggataaggtagtacaactcacagaacagcagatagaga 2043
Query: 421 aagaaaagcagagacgactcaaaaagcttaagagcgataagaagacgaaacacaagacc- 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2044 aagaaaagcagagacgactcaaaaagcttaagagcgataagaagacgaaacacaagaccg 2103
Query: 480 ggtgtggtttacctatcgagggttccaccgtacatgaaaccagccaagctaaggacagat 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2104 ggtgtggtttacctatcgagggttccaccgtacatgaaaccagccaagctaagg-cagat 2162
Query: 540 tctcacaagattcggtgaagtggaccgtctgttcttgaaacgtgaagaggagcacaagca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 tctcacaagattcggtgaagtggaccgtctgttcttgaaacgtgaagaggagcacaagca 2222
Query: 600 ccagcagcgtgtcaagagtggtgggaacaagaaaacgatgtttgaagaaggttgggccga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 ccagcagcgtgtcaagagtggtgggaacaagaaaacgatgtttgaagaaggttgggccga 2282
Query: 660 gtttatcagaaagaaggacgctaaactgtgcgcatcgactctaaacggtaatattatcgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2283 gtttatcagaaagaaggacgctaaactgtgcgcatcgactctaaacggtaatattatcgg 2342
Query: 720 tggtaagaagggaaatttctaccatgacgacgtcatgaacgttaaatacttgcccgggtt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 tggtaagaagggaaatttctaccatgacgacgtcatgaacgttaaatacttgcccgggtt 2402
Query: 780 caaatgggccgatttgacagaacaaatcgctagagaaaacgatatcagacaagcaaagct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 caaatgggccgatttgacagaacaaatcgctagagaaaacgatatcagacaagcaaagct 2462
Query: 840 acaatt 845
||||||
Sbjct: 2463 acaatt 2468
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7276
Number of Sequences: 1807
Number of extensions: 7276
Number of successful extensions: 666
Number of sequences better than 1.0e-20: 1
length of query: 845
length of database: 10,358,551
effective HSP length: 16
effective length of query: 829
effective length of database: 10,329,639
effective search space: 8563270731
effective search space used: 8563270731
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)